rs212856677 SNP Detail

Summary

• ID
  rs212856677
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79105891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTATGTT CTATCTCAGA
  CAAGAAGGGC TTTCCATGTG ACCTTCCAAG GTGGCCCACT CGAGTTGCCC CTCATGTCTC
  AGGTGTGTGT GTTGAGTTCC CTCAGTAGGT CTCTACTTCC TGGAGGGCCT TTCCTCTGTT
  GTTCCTTTGA GCCAGAATTG AGACAGTCAC CAGTGGAACT GGGTCTGCTA GAGAGTCATG
  A
  CCAGTGGGCA ATTGGAGAAG AAGTAATGGA CCCACCAGGA AATATCCCAC TGGAAAGAGA
  AGAGCAGAAA TTATTTTCAC ATATGAACAT GTCTGGGCCT GCCAAAGGGG TGCCTAGAGT
  CCTCCAGTCC CTTAGGTGAT GATTCTCCCA GAAGACATCT GTCTTGTCTG TCTTGTCCTA
  CTCATTCCAG CCCACAACCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759334	CHEV_11_79028567	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212856677					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79105891 () rs orientation: forward

Symbol	Name	Function Class
Gm11200	predicted gene 11200	1822 bp downstream
Gm74268	predicted gene, 74268	within coordinates
Rr402771	regulatory region 402771	697 bp downstream
Rr452198	regulatory region 452198	363 bp distal
Rr452199	regulatory region 452199	922 bp distal