rs212829023 SNP Detail

Summary

• ID
  rs212829023
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:108993780 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTGAAAGC CCGCTGAGGA GAGAGAAAAG
  CAGGAATAAA GTGGACACAG GGAAGGAAAA GAGCCCATCA TTCCCTGGGG GCTTGGGTGC
  ATTCCTAGGT GACTGAGTGT CAAAGCTTTT GACAGCACCT GCAAAGGACA GGATACCCCC
  C
  TCTGCTAAGA AAATCGCATG AACAAGATTA CGAAATATGT TTACAGCCAA AATGCACTTC
  ATGACACTTA GTAGCTGCAT ACCATGAGTT TTTCTGACGA AATCTTACCA CAATTACGAA
  TCATGCTGAC ACTCAAGATG TCTTATCGCC                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321253506	CHEV_4_108809188	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212829023					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108993780 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm52703	predicted gene, 52703			within coordinates
Osbpl9	oxysterol binding protein-like 9			Intron
				Noncoding-Transcript-Variant
Rr597274	regulatory region 597274			within coordinates