rs212827584 SNP Detail

Summary

• ID
  rs212827584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165468203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccaacaaga ccacacctac tccaacaagg
  ccacacaccc taatagtgct gctccctgtg ggccaagcat tcaaacacac aagtctatgg
  gagtcattcc tactcaaact agcacaCATA CCCAAAAGTG TCAATAAAAT GGCCACAGTG
  Y
  GAGGCTCTGA CTAAGTGAAC GTGGGAACAG TTGATCCCAT TTCAAAACAG GACCATGGGC
  CTTAGATGAC CAGCTCCATT CAGAGGAACA ACCAGAGAGA GGAGCAGAGA CGTGCTCCAA
  GAGACAGAGG AGGCACAGAG GAGACACCAC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320608498	CHEV_2_165451783	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212827584					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165468203 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	602 bp proximal
Rr569966	regulatory region 569966	1665 bp proximal
Rr569967	regulatory region 569967	1779 bp proximal