rs212674856 SNP Detail

Summary

• ID
  rs212674856
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGTCCATG ACATCGTGCA
  AGAAATTTTG ATTTGCATAA AAATGTACCA GACCACCCCA ACCCTTGCTT CCTATTCTGC
  TCTATTTTCA GAACCCAGGC TCAAATATAG GAAAATTAAG TAGCCTTGAC ATTCAGGTCT
  GTAGCCAATC AGTGATTTTA AGGGTTTCAA AGTACTTTTA TTTCTCCCTC CACTCCTAAC
  Y
  AAGCAATAAA GTAATATCGT ATTTGGGGGG CACATACTGT GTGTGAATCC TTAGGTCACT
  GATTCATAAA CACTTCACAG TAAGGAAGCA TCCCCATTTT TATCTTTAAA CATTTTTGGT
  CTGGTTTACT TTTTTATTTG TTTTTCCAAA CAGGGTTTCT CTGTGTAACC CTGGCTGTCC
  TGGAACTTAC TCTGTAGACC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337141	CHEV_4_132442904	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212674856					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614300 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14976	CpG island 14976	1998 bp distal
Gm13033	predicted gene 13033	573 bp downstream
Gm70413	predicted gene, 70413	773 bp downstream
Rr601103	regulatory region 601103	1676 bp distal
Rr601104	regulatory region 601104	671 bp proximal
Rr601105	regulatory region 601105	855 bp proximal
Rr601106	regulatory region 601106	965 bp proximal