rs212639843 SNP Detail

Summary

• ID
  rs212639843
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54458475 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAGGGAG AAGGAGAGGG
  AGGAGAGGGA GAGAGATGGG ATGGGGAGAA AGGGCAGGGA GAGAAGGAAT AGAGAGTAAG
  AGAGCAAGGA GAGCCCAAAC AGCCCCTTTT ATAGTAAGCT AGGCATTACC TGGCTGTTGC
  AAGGTAACTG TGGGGCAGAG GCTAGAAGGA ATGCTAACAC ATATTGTATG GTTCCTGGGA
  R
  AAGAGGGGAG GAGAGAGGCA GTGACCATGA GGAGTACAAA ATGAGACCTC GGGATACTAA
  TAAAGGCTCC ATCTCTAACA CCTGTGGAGG AGTGTGAGGG TGTTTGCTCA TGCTCATCTG
  CTGAACTGGC ATCTATCCTA TGTCTACTTA CTTTGAAAAT AATCCTAGAC CTATGTGGCT
  GGAGAGCTGG CTCAGCTGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771844	CHEV_3_54354976	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212639843					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54458475 () rs orientation: forward

Symbol	Name	Function Class
Rr576802	regulatory region 576802	851 bp proximal