rs212628240 SNP Detail

Summary

• ID
  rs212628240
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143746821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTACTTG GCACCACCCC
  TTTCATGTCA AGATGGGACA CCAAGGACAT AAACCACAGC AGCCCTTATC CAAAAACGAC
  CAACATGCAT ACAGACAAGC CGTTCAGTTC TACATTCAGA TATCTTAGAT ATGAGGTCTA
  ATTTCTTGAT AGGAGTATAT CTGTGCTCTC TTCCTCCAAA CTTCCACCTC TCAGTGAACC
  Y
  GGCAGCTGTC TCCTTTATAT TCATTCACAT TGGTCACAGA GGCCAACTCT ATGGCTTCCC
  TTTGTGGATG GCTTGCTGCC TGAAGACCTG GTAACATTTG GCTAGGTGGT GGTGGCGTAA
  CATTTGCCTG GCGTGATCTG CCCCACTGCT TAGGATCTAG AACAATCCCA GGGGAGCTCA
  GCCTCTCTTG CCTTTTATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320535036	CHEV_2_143730637	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212628240					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143746821 () rs orientation: forward

Symbol	Name	Function Class
Rr566332	regulatory region 566332	745 bp distal
Rr566333	regulatory region 566333	171 bp proximal