rs212455540 SNP Detail

Summary

• ID
  rs212455540
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115026486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCTTCCA CGGTGGTTGA
  TTCCCTTTTC CTCTTCTCAA ACCAGGACAA GAATGTTTTA GGCTCACAAC TATGTCTGGT
  GAGTTTCACG GAACTAACCG ACTCTGAGAC TGTGTCCCCC GGGGTCCCTC ACTCACGTGT
  GAGTCCAAGC TCTTCAGCAG TTTATCAAAG TTACTGTTTA GCATGATGGT AACAGTCCCC
  Y
  GATTCCAGAA TCTTCTATTT CAGGGAAGTA GCTCTTGTGT GCGCGTCTCT GGATTTGTTT
  GTGTGTCCTG ATCTCAGGGA GCAGGAGCTC TTTGCCTCAG TTCAGGGAAA GCAGTGTTTT
  TCAAGCTGCC TAACCTTTTC TTGTACGAAT GGAAGCTGTG GCACCCCAGC TTTCTACCTG
  CTGGAGATGA CGCAGGACTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321915119	CHEV_6_114999543	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212455540					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115026486 () rs orientation: forward

Symbol	Name	Function Class
Rr636916	regulatory region 636916	171 bp distal
Rr636917	regulatory region 636917	283 bp distal