rs212402898 SNP Detail

Summary

• ID
  rs212402898
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119371242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCTCTCCA CCAATTGAGC
  CATATCCCCA GCCCTGGTTT GGGTTTTGTT TGTTTTTTGT TTTTCGAGAC AGGGTTTCTC
  TGTGTAGTCT TGGCTGTCCT GGAACTCACT TTGTAGACCA CGCTTGGCCT CGAATTTAGA
  AATCTGCCTG CCTCTGCCTC CTAAGTGCTG GGATTAAAGG CGTGCGCCAC CACCACTGCC
  Y
  GGCCTGGTTT AGATTTTGGA CATAGGTTCT CATGTATTCC AGGCTGGCCT CAAACTCATT
  ATGTAGTTGA GACTGGCCCT AAATTCCTGA CTTCAGGACT TCTTTTTGCC TGAGACAAAT
  TAATCCTTTA CATCAGTGAT ATTTTCCCCC TCTGTTGAAG CCAAAAGCAA TTTCAATAAC
  AAGATTAATT TTAATATTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320475981	CHEV_2_119366497	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212402898					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119371242 () rs orientation: forward

Symbol	Name	Function Class
Exd1	exonuclease 3'-5' domain containing 1	Intron
Rr563525	regulatory region 563525	1612 bp distal
Rr563526	regulatory region 563526	1442 bp proximal
Rr563527	regulatory region 563527	1533 bp proximal