rs212246166 SNP Detail

Summary

• ID
  rs212246166
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152448076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAACGCT TCTACCGCTA
  CGGCATCAAG CCCGAGTGGA TGATGGTTCA CCGCATCCTG AACCACAGGT GAGGGTGTTG
  GGTAGCACCT GCCGGGTGAG GGCTGTCCAG GCTTGCCTTT CAGAGCCAGG AGTAGGCTCA
  GTGGGGCAGG AGCCGAGTAA GGACATCTCA CTGCAGGGGA TGTGGCTGTC CAACCAGGAG
  K
  GTCACGCCTC TGCACAGGGG AACTGTCATG CTCAACATTC TCACTCTCAG TAGGACAGTG
  CCACAGACAC ACACAGCAGG GCAGTGCCAC AGACACACAC AGCAGGACAG TGCCACAGAC
  ACACACAGCA GGACAGTGCC ACTGACACAC ACAGCAGGAC AGTGCCACTG ACACACACAG
  CAGGACAGTC CCACGGACAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434327	CHEV_4_151737728	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212246166					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152448076 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Intron
Rr605861	regulatory region 605861	1661 bp proximal