rs212219812 SNP Detail

Summary

• ID
  rs212219812
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153420397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggcaacact tgtgggtctc aagtcttcgc
  tgataacaca gacagacttg ctccagagaa cctttctaaa caggcccacc atcaatcacc
  ccatcccacc cctaccatcc tgccccatat tctttctttt ccactacctc tggtgggtga
  Y
  gggctacaag ggaggtaaag tatttaagaa cgatcattaa aaataaggat tgaaataatt
  aaagttacaC CAAGCCTTGT GAAACTGAGA TCCAAAATAA ACCTTCCTGC CCTACAGAGT
  TCACAGCGGG TTTTGTCACA CGGACAAAAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320564193	CHEV_2_153404213	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212219812					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153420397 () rs orientation: forward

Symbol	Name	Function Class
Rr567686	regulatory region 567686	1984 bp distal
Rr567687	regulatory region 567687	913 bp distal
Rr567688	regulatory region 567688	751 bp distal