rs212194338 SNP Detail

Summary

• ID
  rs212194338
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17902896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGATGTAA GGGCCTTGGC TTGCTCCTGC
  CTTTATCCTG TGAAGTGACT AATTATATTG GTTCTAGACT CAAATAGACC TAAATTTGAA
  TCCAGGGCAG TACACCCTAG ATACTAAGAA CCCGAACATG TAGATGGAGA GAGTGCTCCA
  Y
  TTGGAGGGAG AGAATTATCG CAACAATCAG CAAAGTACCT AGAGATAGAA GGAGACATCT
  GTCACTTTAA TGTACACACC TCCCATGTTT TGTCCACTAA AATGGTGTGC CTCGCTGGGA
  TGCTGCTTCT AAAGCATCAA CTGTAATCTG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320673845	CHEV_3_17748732	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212194338					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17902896 () rs orientation: forward

Symbol	Name	Function Class
Gm42187	predicted gene, 42187	within coordinates
Gm65968	predicted gene, 65968	within coordinates
Rr573861	regulatory region 573861	255 bp distal
Rr573862	regulatory region 573862	338 bp distal