rs212146044 SNP Detail

Summary

• ID
  rs212146044
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:159427537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agggatttt tctgaagtta ttttgagtta
  tttatcttcc tgcttaaaga gcttccctaa atgatggaag gtttcaatct cagagaaaac
  tgttaaacaG TAAGCCTTTT CAGatatata tatatatata tatatatata tatatatata
  K
  atatatatat atatataCCA TATCTAGTTT GTTTCCTGTC ATCAATACCT TAGTATGGTT
  ACTGTTTCAA TATACAGCCA TAAAGGGGAA TATATGAGAC CAGAGAGGTA TGCAAGGAGA
  CCTACAGAGC ATAAAGGGGT TAGATCTGTC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320591767	CHEV_2_159411353	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212146044					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:159427537 () rs orientation: forward

Symbol	Name	Function Class
D2Mit411	DNA segment, Chr 2, Massachusetts Institute of Technology 411	810 bp proximal
Rr568924	regulatory region 568924	1133 bp proximal
Rr568925	regulatory region 568925	1183 bp proximal
Rr568926	regulatory region 568926	1562 bp proximal