rs211978318 SNP Detail

Summary

• ID
  rs211978318
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101856536 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATTTGGG TTTGATCATA
  TGCATGCCCA ATTACTCAGA GGCATAAGAG AGCCAATAGA GAGTCTTCTT GAAATTTTAT
  TTGAGACACA CATTTGAAGG ATTGTGCATA TACCCCAAAC TGTTCAGGCA TTTCTCTTCC
  ATAAGGAAGG TATGATTGAA TAAAATCTGT CTACATCTGA TGATTGTCAT GGCGGGGTGG
  S
  GGGGGAGGAT GGAGAAACTT ATCCTAATGT TCAGAGAGAG GTATATATGT AGCTGGATGC
  AAATGGGGCC TGAGGTTATT GGATGCATTG TTCCAGAGAG GGGTGTTATG TGTAAGTAAA
  AAAGCTGGGC TTCCACTTGC GTTATCAGAA GGCGATTTCA TAAACCAAAC CAAGAAGAGT
  CCCACATTAT TAAACCATTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321231989	CHEV_4_101671944	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211978318					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101856536 () rs orientation: forward

Symbol	Name	Function Class
Rr376932	regulatory region 376932	1058 bp downstream
Rr596214	regulatory region 596214	359 bp distal
Rr596215	regulatory region 596215	595 bp distal