rs211851656 SNP Detail

Summary

• ID
  rs211851656
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:72925978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CAGATATGA TTGCTAATAG TGTGATATCC
  CTGTAGACTA CAAAGCCCAA AGCTATTCAG TATATAGCTC ATAGCACTGT ACTGAATTAG
  CTATGCTGCA CTGGTGGTAG AAATAAacac acacacacac acacacacac acacacacac
  W
  cTCGCATGTA CACATGGTCC TGTTTGCAAC CTCAAACCTC CTTATCATGT ACAAGTAAAC
  ACTGCTGGAT AAGGAGTATA AAGCAGTTCA TAAATTCTTC ATTTATCCAG AGCTCAAAAT
  TTAAACATCA GTTTTGGAAG TTAAAAATGT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320344371	CHEV_2_72933691	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211851656					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72925978 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ola1	Obg-like ATPase 1			Intron
				Noncoding-Transcript-Variant
Rr559097	regulatory region 559097			5 bp distal
Rr559098	regulatory region 559098			1027 bp proximal