rs211835748 SNP Detail

Summary

• ID
  rs211835748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:13666024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCTCTATT AAAACTTCTT
  CGTGTCCTTA CCACGTCATC TTAGAGTCTG AAACTTCCTT TCCTCTATAA TTAACTGTTA
  GCTACAAGAT GCAAAGGCGA TTGTAACTAC AGAGAGCCTA CTTCCCTATA GCATTTTAGA
  AGGCCTCTGC ATACTTCACA TTAACCAAAA CTGTCTTTAA GTCGTCCTTT TCATCATACT
  Y
  CACATTAACC AAAACTGTCT TTAAGTCGTC CTTTTCATCA TACTTCACAT TAACCAAAAC
  TGTCTTTAAG TCGTCCTTTT CATGTCTTTT GAGGTTCATT ATCTGCTTAT CTAACATTTT
  AAAGGATTCA ATTCGTATGT ACTTGATTGA CATCAATTAC AAACAACTTA ATATTGTAAT
  ATTTTCATTA GCAGTCAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321748467	CHEV_6_13616025	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211835748					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13666024 () rs orientation: forward

Symbol	Name	Function Class
Rr626579	regulatory region 626579	within coordinates
Samtor	S-adenosylmethionine sensor upstream of mTORC1	Intron