rs211776139 SNP Detail

Summary

• ID
  rs211776139
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103107257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTTGAGCA TACACCTGAT AGTAAAGCCa
  ctggccagga aaaagcagga cagagttcag ggcaaccaaa gctgctggaa ggtgatgggg
  gaaggctagg aagagaaagc caacaggacg gtttctgacc aagtctctgg ctgactcaga
  Y
  ccataccgtt tggggaagac tatagtcagc cagctaagat ggaaataact aagctaaaat
  acaagctgTT CTTTTAAGAG TATTTTGTCT TTTCAGTGCA TCAAGGGGAA CTGATAAGAC
  AATGTTTTTT GAAGGTAGGG AACTGAATGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321236294	CHEV_4_102922665	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211776139					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103107257 () rs orientation: forward

Symbol	Name	Function Class
4921539E11Rik	RIKEN cDNA 4921539E11 gene	Intron
Rr376942	regulatory region 376942	112 bp downstream
Rr596380	regulatory region 596380	34 bp distal