rs211732630 SNP Detail

Summary

• ID
  rs211732630
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:131872107 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAATGCTGT GGCTTCGCGT CGCCTCCTCC CTTCATCTCT
  ACCCCCCCCC TCCCCGCGTA CCCCCACCCC ACCTCGCGCG GGCTGCCAGC GTTTCTTCTC
  R
  GCAGGCCAGA GTGCATGAGG AGGAGGAGGC GGAGAGCGTG GGTGGAGGGA ATAAGGTGCT
  GCCTCTCACC CCATCGCGCC TGCCCTCTCC AAGCCACGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320508275	CHEV_2_131855923	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211732630					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131872107 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12299	CpG island 12299	within coordinates
Gm31179	predicted gene, 31179	264 bp upstream
Gm75461	predicted gene, 75461	within coordinates
Rassf2	Ras association (RalGDS/AF-6) domain family member 2	mRNA-UTR
Rr367316	regulatory region 367316	711 bp downstream
Rr397324	regulatory region 397324	within coordinates
Rr565379	regulatory region 565379	1692 bp distal
Rr565380	regulatory region 565380	within coordinates
Rr565381	regulatory region 565381	122 bp distal
Tssr20293	transcription start site region 20293	1833 bp downstream
Tssr20294	transcription start site region 20294	201 bp downstream
Tssr26436	transcription start site region 26436	1003 bp upstream
Tssr26437	transcription start site region 26437	982 bp upstream
Tssr26438	transcription start site region 26438	383 bp upstream
Tssr26439	transcription start site region 26439	374 bp upstream
Tssr26440	transcription start site region 26440	365 bp upstream
Tssr26441	transcription start site region 26441	343 bp upstream
Tssr26442	transcription start site region 26442	286 bp upstream