rs211712977 SNP Detail

Summary

• ID
  rs211712977
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105175004 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTACACTT AGTGTGCACA
  AATGAGAAGC ATTTTTTATT AGATATTTTC TTTATTTACA TTTCAAATGT TATCCCCTTC
  CCTAGTTCCC CTCAGAAAAT TCTCTATCTC CTCCCCCTCC GCCTGCTCCC CAACCTACCC
  ACTCCTGCTT CTTGGCCCTA GCATTCCCCT ATACTGGGGC ATAGAGCCTT CACAGGACCA
  R
  GGGCCTCTCC TCCCATTGAT GGCTGACTAG GCCATCCTCT GCTACATATG CAGCTAGAGC
  CATGAGACCC ACCATGTGTT TTCTTTGATT GGTGGTTTAG TTCCAAGAAG CTCTGGAGGT
  ACTGGTTAGT TCATATTGTT GTTCCTCCTA TGGGGCTGCA AACCCCTTTA GCTCTTTGGG
  TACTTTCTCT AGCTCTTTCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243602	CHEV_4_104990412	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs211712977					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105175004 () rs orientation: forward

Symbol	Name	Function Class
Gm40217	predicted gene, 40217	within coordinates
Rr596596	regulatory region 596596	623 bp distal
Rr596597	regulatory region 596597	727 bp distal