rs16811863 SNP Detail

Summary

• ID
  rs16811863
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137132968 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                            T GTGGTGGGAG GCCTTGGATA
  ATCAAANTGT GATGCTTGTG GGAAAGTGAC AGNNTCCCCT GAGGagctgc atagtctgtg
  cactgcacat ttcagagggc gctatttttt tcccatgtga atagcangtt ctggagctgt
  acagnncata gcctgtgaag ccactggtgg cancccATGG TGTTGGGTCT GGGCCACTCA
  AGCTCTTTCC TTCTTGGCCA CCANGTCTCC CTTCAGTATG AGANGGNTGG GAGCTTCNAC
  CATACCTGTG GTGGCTCCCT CATTACCCCT GACTGGGTTN TGACTGCNGG CCACTGCATC
  NNGTNAGTTN NATCCCCCAT NCCTNTCCNA CTCACTATCC CTGCANGTGT CCTGGGCAGC
  TGGNACAATA GGAGAGGAGT GAGNTTGGCT CCAGGNTTAT ACTGACCTCC ANTCTTCTGC
  AGGNCNTNNC NCANNTACCN GGTNGTACTT GGGGAGCATG AACNTGGTNT GGAGGANGGC
  Y
  CAGANCAGGT GATCCCCATC AANGCTGGAG AACTCTTTGT GCACCCCAAG TG        
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	PERA	SM/J	SPRET/EiJ
ss24767015	Ela3b_AN6773_39	ROCHEBIO	RPAMM	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	DBA/2J	LG/J	MRL/MpJ	NZB/BlNJ	PERA	SM/J	SPRET/EiJ
rs16811863					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137132968 () rs orientation: reverse

Symbol	Name	Function Class
Cela3a	chymotrypsin-like elastase family, member 3A	Coding-NonSynonymous
Rr602614	regulatory region 602614	840 bp proximal