rs16811847 SNP Detail

Summary

• ID
  rs16811847
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137133085 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                         TGTG GTGGGAGGCC TTGGATAATC
  AAANTGTGAT GCTTGTGGGA AAGTGACAGN NTCCCCTGAG Gagctgcata gtctgtgcac
  tgcacatttc agagggcgct atttttttcc catgtgaata gcangttctg gagctgtaca
  gnncatagcc tgtgaagcca ctggtggcan cccATGGTGT TGGGTCTGGG CCACTCAAGC
  TCTTTCCTTC TTGGCCACCA NGTCTCCCTT CAGTATGAGA NGGNTGGGAG CTTCNACCAT
  ACCTGTGGTG GCTCCCTCAT TACCCCTGAC TGGGTTNTGA CTGCNGGCCA CTGCATCNNG
  TNAGTTNNAT CCCCCATNCC TNTCCNACTC ACTATCCCTG CANGTGTCCT GGGCAGCTGG
  R
  ACAATAGGAG AGGAGTGAGN TTGGCTCCAG GNTTATACTG ACCTCCANTC TTCTGCAGGN
  CNTNNCNCAN NTACCNGGTN GTACTTGGGG AGCATGAACN TGGTNTGGAG GANGGCNCAG
  ANCAGGTGAT CCCCATCAAN GCTGGAGAAC TCTTTGTGCA CCCCAAGTG            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24766999	Ela3b_AN6773_23	ROCHEBIO	RPAMM	f	SNP	A	G	G	A	G	G	G	G	A	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	LP/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16811847					SNP	A	G	G	A	G	G	G	G	A	G	G	G	A	G	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137133085 () rs orientation: reverse

Symbol	Name	Function Class
Cela3a	chymotrypsin-like elastase family, member 3A	Intron
Rr602614	regulatory region 602614	723 bp proximal