rs16811833 SNP Detail

Summary

• ID
  rs16811833
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  123
• Last Updated in dbSNP Build
  123
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137133225 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                               TGTG
  GTGGGAGGCC TTGGATAATC AAANTGTGAT GCTTGTGGGA AAGTGACAGN NTCCCCTGAG
  Gagctgcata gtctgtgcac tgcacatttc agagggcgct atttttttcc catgtgaata
  gcangttctg gagctgtaca gnncatagcc tgtgaagcca ctggtggcan cccATGGTGT
  TGGGTCTGGG CCACTCAAGC TCTTTCCTTC TTGGCCACCA NGTCTCCCTT CAGTATGAGA
  W
  GGNTGGGAGC TTCNACCATA CCTGTGGTGG CTCCCTCATT ACCCCTGACT GGGTTNTGAC
  TGCNGGCCAC TGCATCNNGT NAGTTNNATC CCCCATNCCT NTCCNACTCA CTATCCCTGC
  ANGTGTCCTG GGCAGCTGGN ACAATAGGAG AGGAGTGAGN TTGGCTCCAG GNTTATACTG
  ACCTCCANTC TTCTGCAGGN CNTNNCNCAN NTACCNGGTN GTACTTGGGG AGCATGAACN
  TGGTNTGGAG GANGGCNCAG ANCAGGTGAT CCCCATCAAN GCTGGAGAAC TCTTTGTGCA
  CCCCAAGTG                                                        
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	CAST/EiJ	DBA/2J	FVB	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
ss24766985	Ela3b_AN6773_9	ROCHEBIO	RPAMM	f	SNP	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	BALB/cByJ	BALB/cJ	BUB	C3H/HeJ	CAST/EiJ	DBA/2J	FVB	LG/J	MRL/MpJ	NZB/BlNJ	NZW/Lac	PERA	SM/J	SPRET/EiJ
rs16811833					SNP	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137133225 () rs orientation: reverse

Symbol	Name	Function Class
Cela3a	chymotrypsin-like elastase family, member 3A	Coding-NonSynonymous
Rr602614	regulatory region 602614	583 bp proximal