GGAAACCTGT CTCTAGAGCT GTATCCCCAC TCAGCACCTT AGATGACCAT ACAATCATAG CTGTGCTCCT TGTGTAAATA CCCAGAAAGT TTACTTTCTT ATAAACACAC ACACCCAAAA CACATGCACA TGAGAGCATC CCTGCATCCG ACCTTACACG GGATCCCATC TCTTCACGAT AGCCTGTGAT TACCCACAGT R CCTTCAGCAG TTTGTCTTTG TGTTTGTTTT TTTATTGTTT TCTTTTGTTT TGTTTTGTTT TGTTTTTCCT TTTCAACATT GAGAACATCC ATCTATGTGT CTTTGTGGAC TTCTAACTGT AGAATAAACT CCTGAAAGTG GAACTGATGG GCTAATTTCA TTTGAGAATA GTAATCCTAT TTTTATAATC CTTTTAATCC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
C57BL/10J |
C57BLKS/J |
C57L/J |
CAST/EiJ |
DBA/2J |
DDK/Pas |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SEG/Pas |
SPRET/EiJ |
WSB/EiJ |
ZALENDE/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss16377681 | 07.125.058 | TWGNF | TWGNF-Mouse-2 | f | SNP | G | A | G | G | G | G | G | G | G | G | ||||||||||||||
ss45997074 | mCV24311289 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A | G | G | |||||||||||||||||||
ss47310499 | NES11528797 | PERLEGEN | MM_PANEL2 | f | SNP | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | |||||||||
ss145951413 | ENSMUSSNP2204782 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | G | |||||||||||||||||||||
SNP Consensus Information | |||||||||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
C57BL/10J |
C57BLKS/J |
C57L/J |
CAST/EiJ |
DBA/2J |
DDK/Pas |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SEG/Pas |
SPRET/EiJ |
WSB/EiJ |
ZALENDE/EiJ |
||||
rs13479548 | SNP | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47310499 | NES11528797 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr7:135721938 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D7Mit290 | DNA segment, Chr 7, Massachusetts Institute of Technology 290 | 826 bp distal | ||||||
Rr381537 | regulatory region 381537 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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