rs13470698 SNP Detail

Summary

• ID
  rs13470698
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152070293 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GTTCC CCTTCAGCCG CCCGGAGCTG
  C
  TGAGGGAGTG GGTGCTCAAC ATCGG                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433807	CHEV_4_151359945	CHEVERUD	SCREENING_POP	r	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs13470698					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152070293 () rs orientation: reverse

Symbol	Name	Function Class
Rr605694	regulatory region 605694	1393 bp distal
Rr605695	regulatory region 605695	1360 bp distal
Rr605696	regulatory region 605696	39 bp proximal
Rr605697	regulatory region 605697	234 bp proximal
Rr605698	regulatory region 605698	898 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Coding-Synonymous