rs13469713 SNP Detail

Summary

• ID
  rs13469713
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:167380865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTCC TTCTCGTCCA CCTCGGCCTC
  G
  TCCCTGGAGG CCGAGGCCTT CATCG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148264065	ENSMUSSNP702788	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs13469713					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:167380865 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12746	CpG island 12746	within coordinates
Gm75792	predicted gene, 75792	within coordinates
Rr397509	regulatory region 397509	735 bp downstream
Rr570626	regulatory region 570626	1631 bp distal
Rr570627	regulatory region 570627	740 bp distal
Rr570628	regulatory region 570628	963 bp distal
Rr570629	regulatory region 570629	263 bp proximal
Snai1	snail family zinc finger 1	Coding-Synonymous
Tssr21819	transcription start site region 21819	735 bp downstream
Tssr21820	transcription start site region 21820	837 bp upstream