GTTCT GATGCTGCCG GGGCTCCTGC K TGCAGTTTCT CTGTCAGCTC CAGCA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37193305 | NES08420741 | PERLEGEN | MM_PANEL2 | r | SNP | C | C | A | A | C | C | A | C | A | C | ||
ss38825078 | mCV23675932 | ABI | CRAMUS_MOUSE | f | SNP | G | G | T | |||||||||
ss132249183 | ENSMUSSNP2205597 | ENSEMBL | ENSEMBL_Sanger | r | SNP | C | C | ||||||||||
SNP Consensus Information | |||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C57BL/6J |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
PWD/PhJ |
||||
rs13463331 | SNP | G | G | G | T | T | G | T | G | T | G | T | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37193305 | NES08420741 | PERLEGEN | MM_PANEL | r | SNP | A/C |
Location: Chr11:60092662 () rs orientation: reverse | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi2979 | CpG island 2979 | 1661 bp distal | ||||||
Mir6921 | microRNA 6921 | 1219 bp upstream | ||||||
Mir6922 | microRNA 6922 | 426 bp downstream | ||||||
Rr448350 | regulatory region 448350 | 1992 bp distal | ||||||
Rr448351 | regulatory region 448351 | 1755 bp distal | ||||||
Srebf1 | sterol regulatory element binding transcription factor 1 | Coding-Synonymous | ||||||
Noncoding-Transcript-Variant |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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