rs108930860 SNP Detail

Summary

• ID
  rs108930860
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTTCCTG TATTATCATT
  CCACTTAGGA CTTTAAGCGC CACACTTAAT AACGGTATTT TTCCATCCCT AGCTTTAGAG
  AAGTGCTCTC AGTCTTTCCC AATATATAAT ATAATGTTAA TATCCAGTAT AATGTTATAT
  AGAATAATGT TAACTATGGG TATCTTAAGT ATACTAGTTT GAAATATGCC CCTTGTGTTC
  M
  AAATGTTACA GTGAGCTTCA TCAAGGAACA TTTCTGATTC ATTAGAATAT TCACATGATT
  TCATAGGATA TTATCCTACA CTCTAAAGAT ATTAAAGATT TCACTAAGAT CTGATAAAGA
  CGTTCAACAA ATAGAAATGG GGCTTAGTTT GAAGCTCACC AAGCTTCAAA AATATAACTA
  GAGACAGACC TACAAGGGGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136098029	ENSMUSSNP878666	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
ss321026845	CHEV_3_151435363	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs108930860					SNP	A	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478036 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1340 bp distal
Rr587416	regulatory region 587416	1013 bp distal
Rr587417	regulatory region 587417	1082 bp distal