rs108926311 SNP Detail

Summary

• ID
  rs108926311
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138784431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAACATCTG GGAGGAAGAA
  AGAATTCTGG GATAGAGCCA AGCATGGGAG ATTCACCCAG GAAGATGGGA CAAGATGGAC
  ACATGGTACC TGAGCCCAGT CCCCTGGCAG AATGTAGAAT AAAATAAATG GGATAATTTA
  AGTTATGATC TAGCTATATG GCCAATGCGT TTGTAAATAT ATTTTGAGTC TGAGTTTTAT
  Y
  TCTGGGAGCA TGGGACTGAG AGGAAATACC AGGCCTAAAC TTCTCCAGTT ATTCAATAAC
  TAAATAGAAC AACCAGTCTA TATTATTTTA TTTTAAGAAA AAGTTTCTCT ACTGGCTTGA
  GTGTCGGACT GTGTTCGCTC TTTGTGTTCC TAGATGTCCC TGCTTTCAAA CAAGGTAAAC
  GACAAGAACA ATTGCTTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss135960470	ENSMUSSNP2180146	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108926311					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138784431 () rs orientation: forward

Symbol	Name	Function Class
Rr586245	regulatory region 586245	449 bp distal
Rr586246	regulatory region 586246	1253 bp proximal