rs108924255 SNP Detail

Summary

• ID
  rs108924255
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:77066627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTATTTTGTT CTTGTGTTAA ATAAAACCAT TTCTGCTTTT
  GAGGGACTTT AGAAAACATT AGGCTGGGCA GTGGTGGCGC CCGCCTTTAA TCTCAGCACT
  G
  GGGAGGCAGA GGCAGGCGGA TTTCTGAGTT CGAGGCAAGC CTGGTCTACA AAGGGAGTTC
  CAGGACAGCC AGGGCTATAC AGAGAAACCC TGTCTCAAAA A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147545154	ENSMUSSNP2422113	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs108924255					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:77066627 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Katnal2	katanin p60 subunit A-like 2			Intron
				Noncoding-Transcript-Variant
Rr541072	regulatory region 541072			443 bp distal
Rr541073	regulatory region 541073			774 bp distal