rs108920746 SNP Detail

Summary

• ID
  rs108920746
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:188755987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TATGCAGTTT TTGTCTCTCT GAGCCCAAGT TGGCTCATGA
  ATATACTTTT CAAACCTCAT GGAATAAAAC TAGCAAGGAT TACCACCCCC TCCCAACATA
  M
  GCATGCACAA ATACATAAGA ACTTGGAGAT TGTCAATGCA TTTTTGAATG AACACTGGGT
  GAGTCATTGA AGAAATTAAA GAGACCAATT AAACATTCTT A                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss146483429	ENSMUSSNP1555386	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108920746					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:188755987 () rs orientation: forward

Symbol	Name	Function Class
Rr372621	regulatory region 372621	1199 bp upstream
Rr425741	regulatory region 425741	within coordinates
Rr425742	regulatory region 425742	331 bp distal