rs108896243 SNP Detail

Summary

• ID
  rs108896243
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:9598052 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C CTCATTGTTG GTGGGATTGC AAGCTTGTAG AACCACTCTG
  GAAATCAGTC TGGTGGTTCC TCAGAAAACT GGACATAGTA CTATGGGAAG ATCCAGTAAT
  W
  CCTCTCCTGG GCATATACCC AGAAGATGTT CCAACTGTTA ATAAGAACAC ATGCTCCATT
  ATATTCAAAG CAGCCTTATT TATAATAACC AGAAGCTGGA A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134627282	ENSMUSSNP1420850	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss134632789	ENSMUSSNP6780042	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108896243					SNP	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:9598052 () rs orientation: reverse

Symbol	Name	Function Class
Rr626471	regulatory region 626471	1485 bp proximal
Rr626472	regulatory region 626472	1558 bp proximal