rs108896232 SNP Detail

Summary

• ID
  rs108896232
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17255023 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A GAGAGTGGTC TGACCACTGA AACTCAGAGG AGAGAGCTAG
  TGTCCCAGGT CTGCTGATAG AGGCTAACAG AATCACAAGA GGAACAATCT CTAACCAGAG
  W
  CAACTAAATC AACTAACTCC AGAGATTACC AGATGGCAAA AGGTAAACAT AAGAATCTTA
  CTAACAGAAA CCAAGACCAC TCACCATCAT CAGAACCCAA C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146863587	ENSMUSSNP1168994	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108896232					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17255023 () rs orientation: reverse

Symbol	Name	Function Class
Rr573816	regulatory region 573816	988 bp proximal