rs108884017 SNP Detail

Summary

• ID
  rs108884017
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138784341 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTAGAGA GACTATCTTG
  TGTATTGTAT GGATGCTTCA CCTGTCAATT CAAAAACCTA AGGCCAATAG GAAAGGGTAG
  AATAGAAGGT GGAACATCTG GGAGGAAGAA AGAATTCTGG GATAGAGCCA AGCATGGGAG
  ATTCACCCAG GAAGATGGGA CAAGATGGAC ACATGGTACC TGAGCCCAGT CCCCTGGCAG
  R
  ATGTAGAATA AAATAAATGG GATAATTTAA GTTATGATCT AGCTATATGG CCAATGCGTT
  TGTAAATATA TTTTGAGTCT GAGTTTTATC TCTGGGAGCA TGGGACTGAG AGGAAATACC
  AGGCCTAAAC TTCTCCAGTT ATTCAATAAC TAAATAGAAC AACCAGTCTA TATTATTTTA
  TTTTAAGAAA AAGTTTCTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135960461	ENSMUSSNP6693488	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108884017					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138784341 () rs orientation: forward

Symbol	Name	Function Class
Rr586244	regulatory region 586244	1993 bp distal
Rr586245	regulatory region 586245	359 bp distal
Rr586246	regulatory region 586246	1343 bp proximal