rs108876779 SNP Detail

Summary

• ID
  rs108876779
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:20562678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATAGAGCC CTGCTTAGCA
  GAAGGGAAGA AGTGTTATTT GGCCTCCCAA GACCATTTCG AGTCTGTTTT TCTGTTTCAC
  ATCCTCTTAC ATTAGGTCAT CCTGCCTCCA TTTCCAGCCT GGGTTGTCTG CCTATCTCTT
  ATTCCCCATC CCTACCCCGT ACATCTCTTT CCTCTGTCCC ATTTGACAGT CACCTTCTGG
  R
  GGACAGTAAG AGGGAGGGGG ATAGAGATTA TACCTGACTC TGCCTAGCAC ACAGTGTGCT
  CTCATGCAGG GAGGCTGACC CACAGAGAAG GTGCACGGTC CTCTGCTAAG ACCCACCAGT
  GGGCAGGAAG GCCACATCCA GGTCTGAGCT GTGTTTCCAG CTTTCAGTCA TGACACTTGG
  CCTGAGTGTA GGCCCACACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss134672231	ENSMUSSNP6754112	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs108876779					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:20562678 () rs orientation: forward

Symbol	Name	Function Class
Rr574081	regulatory region 574081	745 bp proximal
Rr574082	regulatory region 574082	874 bp proximal