rs108872905 SNP Detail

Summary

• ID
  rs108872905
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103112387 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCC TTAGGATGCA GAGGCAGGTG
  R
  ACCTTTGAGT TCAAGGCCAG CCTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135560269	ENSMUSSNP5726991	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss320856688	CHEV_3_103008994	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs108872905					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103112387 () rs orientation: forward

Symbol	Name	Function Class
2410024N13Rik	RIKEN cDNA 2410024N13 gene	within coordinates
Rr375502	regulatory region 375502	within coordinates
Rr375503	regulatory region 375503	1961 bp upstream
Rr397899	regulatory region 397899	1372 bp upstream
Rr582335	regulatory region 582335	1320 bp distal
Rr582336	regulatory region 582336	1373 bp proximal