rs108865115 SNP Detail

Summary

• ID
  rs108865115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163552516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTCTTAAC TGCTGGAGAC
  AGGTATCCTA GGAGAGCCAG GTGGATGCTG TATGAGGTCC CCTAACTTCA TCCTAGAGTC
  AGACACCATC CTTCATTTTA CGTTAGACAT CAGATACTAG GGTATGGCTC AGTGATAAAT
  GGGAGGCCCT AAGCTGAATC CCCAGCACCT CCCAAAAATG AAAGAGGAGG AAACGGAAGA
  R
  AAGGAAGAAA AGAAGTTCTA AAGCCAGCTC ACAACGCATC CAAAAGGATT TAAATTAAGC
  CTCACATCCC CTTCTGTATT TTCTTGATGG TACTGAAACT TCAGCCCAGG ACTGTGTTAT
  GCTAGGCCAG TGGTTTGTCA CCCAGTTACA CTCCCAGCTT TTTAGATGTC AGTGTGTTAG
  GCAGAGTGCC AAACAACTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148209649	ENSMUSSNP6332970	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108865115					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163552516 () rs orientation: forward

Symbol	Name	Function Class
Pkig	protein kinase inhibitor, gamma	Intron
Rr569473	regulatory region 569473	184 bp proximal
Rr569474	regulatory region 569474	1781 bp proximal