rs108834809 SNP Detail

Summary

• ID
  rs108834809
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91178670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTATGACC CTGGCTTGCA
  GGAAGTTTGC TGCTTATGGG AAAAACCTGA GGAGCCTGAT GGTAATACAA CCTGGGGACA
  GTGTCCTGAG ATGTGGCTGC CAGATGTTTG GGGTGAGCTG CGGAAGTGGG GACAGGAGGG
  CAGAGTAGAA GGCTCCCCCA AAACAAGGGA TGTTCCAGCC GAGACCCGAA GACTGAGGGA
  K
  TAGCCAAGTG GGGTTGTGGG GTGGCTGTTC CTGGCTAGTG GTAAAGCGTG ATCCCCAACC
  TGGAGGGTGG TAGAGAGCAG GCACATGGAC GACCCCGAAA AACCTGGAAA GCAGAGGGGA
  AGGGGAGAGG AAAGAGTCAG AAAGTGTCTT CTACTCGGAA TGGAGACACA ATTGGAGCCA
  AACCACCATA AGGCCTTGCG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss133382221	ENSMUSSNP1560539	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs108834809					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91178670 () rs orientation: forward

Symbol	Name	Function Class
Rr634420	regulatory region 634420	135 bp distal
Rr634421	regulatory region 634421	410 bp proximal