rs108832457 SNP Detail

Summary

• ID
  rs108832457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:4463736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAGCCCAT CTGCAGCACA
  GTTACGACAA GCCTGCCTCA GCTGAGCATG ACTTAATGAC ATCTCTAATA AGACCCCAAT
  AACTAAAAAG TCTGAGTCAG CACTGCATCT GGTCCTTCTT TATTTACAAG ATCATTAAGA
  TCACGTCCTA CCTTTTCCCA TTTAAGGTGA TGAATCTCTG GTCCATTTAT TATGAACCAT
  R
  AACAGACTTG GGAGACAAAG ATAAAAACTT TTGTCAAATC TTTCCTTTTA ACTCTAACTC
  CTCTTTCCCT GAGAGAGGCT TTGATATCCT TAATGAAGCG TGCCTCTTTA GAAAGTTTTT
  GGCCCATTTC TATAAGACGG AGAAATGTTA ACTTACCGAG GATGACTTTC TCTCACGAGC
  GGTGAGAACA CTCCTCAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145948726	ENSMUSSNP1966272	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108832457					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:4463736 () rs orientation: forward

Symbol	Name	Function Class
Rr588287	regulatory region 588287	430 bp proximal
Tssr40838	transcription start site region 40838	390 bp downstream