rs108830394 SNP Detail

Summary

• ID
  rs108830394
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:6198426 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G CTCTCATGTC CAGGTTCGAG CCTGGAAGGC ATCTTGGAAT
  CTGGAAGAAA AGAGGGAGCC TAGGTGGGTT GAGAAATAAT GGAACCAAGA CAACTAGTCT
  R
  CTCAAGGGTC AAATTTTTAA TGGCGGACAT GCTTTAGAAA GGAGAGGGGA AAGCCCATTC
  CCGCCAAATC ATCCTTGGAG CCCAGCTGCA GGTGACCACT T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss131946016	ENSMUSSNP1931460	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108830394					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:6198426 () rs orientation: reverse

Symbol	Name	Function Class
Rr378877	regulatory region 378877	within coordinates
Rr626219	regulatory region 626219	769 bp proximal
Slc25a13	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	Intron