rs108826858 SNP Detail

Summary

• ID
  rs108826858
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:100908637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGAAGGCT TGCCCACTGT
  GGGTGGCATC ATTCCTTAGA CTCAGATTCT AAAGAAGGAG AAAGTGAGCC CAGCATAAGC
  ACCCATTGCT GGTTCCTCCA AAATGCAGAC ACAATGGAAC TCACCCTCCT CAAGTTCCTG
  CCACCCCGAC TTTCTTTCCA TCCGGAACTG TATCTTTTTT CTTTTGGTTT TTCCAGACAG
  K
  GTTTTACTGT GTAGCCCTGG CTGTACTGGA ACATTTATCG AAAACTTAAA ATATGCCAGT
  GTCTGTACTA GGTTTTTAAA AAATGTATTT GTATTATGAT CCTCTTTTTA TGAGAAAGCC
  AAACCCCATA TGTGGAAACA CAGTCTGATG ACATAGCTAA TACATGGTAG GACTGTAAGC
  TGAGTTTAGG CTTATGGTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss135543646	ENSMUSSNP1646255	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108826858					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100908637 () rs orientation: forward

Symbol	Name	Function Class
Cd101	CD101 antigen	Intron
Rr581939	regulatory region 581939	1878 bp distal