rs108815529 SNP Detail

Summary

• ID
  rs108815529
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:146824117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGTCAGACGG TATCTTGGGA CTAACTTCAC TTCTATGACC
  ATGGCTTTGA GAAGAGCACT GTCAAACGTC AACATGATTG TTCTGAGCAC CTGTCAGGTG
  C
  TGGGAATGGT ATAGACCCTT TGTGCACATA TTATTTTTTC TCTTTCTCTC TCTCTTTCTC
  TCTGTGTGTG GCCATTCTAC ATGCATGTGG AGGCCAAACA T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147752346	ENSMUSSNP3965149	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs108815529					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:146824117 () rs orientation: forward

Symbol	Name	Function Class
Rr604449	regulatory region 604449	1783 bp distal
Rr604450	regulatory region 604450	1178 bp proximal
Rr604451	regulatory region 604451	1401 bp proximal