rs108799349 SNP Detail

Summary

• ID
  rs108799349
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92259414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAGTGAG ATCTCACTGA
  AACTTAAAAC AGTGAGTGCT CACTGAGTCA CAGGTCTCAA CAGTGGTGAT GTCCAGGAAC
  AGGATATTTC CCATTTCGTA GAGTCCCAGT CAAGCCAGTC ATGCATGGAT TTGCATTTTG
  GTTTGGAAAT TTTGGGACCT GCCCACTATC AGTCAGTGTT GCTCCCACTC GACTGGCCAG
  A
  TAGTCCTATA AATTGGTCCT TGACTGTGAG ACTGCAGACT CCTGGTACTC AGGTCCTAGG
  CTACTTTGGA GAACCTGGCA AGTGTCTTTT CTTGAGTTGC TCTGTCATGT TGTTCTTCCT
  ATGTGCTGTA GTCAATTTTG AGGTAGTGTG TGTCTTGAGT TCAGTTTTGA TCAAGGGATG
  AATGGTAGCT AGCTAGCAGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135481014	ENSMUSSNP2907218	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs108799349					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92259414 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	36 bp upstream
Tssr30284	transcription start site region 30284	34 bp upstream