rs108768034 SNP Detail

Summary

• ID
  rs108768034
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:64155563 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCCACTTC TATTTCTAAC
  CTTACATTTT TTTCTTTTAT TTTTCTGAAA TTATGTGCCC AGAATGGGCT ATCGCCTCAT
  TTAGACCTGG GTTTAAGACC TTCCCGTACA CATAAAGGTT TCTAGTGCAC AGTTCCCCTG
  CTGCTGAACA GGGCTAGTAC GTCCCAAGTG CAGGCAGAAC AGAACCTAGC AGGCACACAT
  R
  AAATGGCAAC TAGTCTTAAG TCTCAGGACT TACAGGAGGC TGCCTGCAGA GGAAGAATAC
  TACCGCTGCG CTATCCTGAT TCACCTGTCA CCTTGGTCAG TGTTGCTTCC TCTTTCCTTG
  GCAGCAGCTG AAGAAAATGG GTCCAGAGCA CTAAGTAGTC ACAAAGCTCG CTAGCTCTTA
  CAGCCTTCAT TTCAACGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148017157	ENSMUSSNP1303349	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs108768034					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:64155563 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Asap1	ArfGAP with SH3 domain, ankyrin repeat and PH domain1			Intron
				Noncoding-Transcript-Variant
Rr503380	regulatory region 503380			1481 bp proximal
Tssr134529	transcription start site region 134529			1574 bp downstream