rs108760328 SNP Detail

Summary

• ID
  rs108760328
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127647146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCACCGC AAACTAATCT
  TAATAATTTA TAATAATATA TACATTTGTT ACAATGTTTT ACTAAAAACT CTCTAAGTAC
  TTCAGGCAAG CCCAAATTAT TTGCCTTTTA AAGAAGACTA AAACTCTAGG CCTATAATAA
  AAACTAGAGT GCATCCTTAG GTCAGACCAA GCCTTACAGG CTATGCTGAC ACGAGTAAGA
  Y
  TAGCTGTGCT CTGTTCAGCC AAAAGGGGGA GCCATGTCGC CTCTGAGGAC CAGCGTTCAG
  TTTGACAGTC AGCCAGAAAC AGATTCTTCC CAACAAGAAA GGCTTCTTGG TGTATTAAAA
  GGTTGCATAC GAGGAACGGC AGTACGGCTG AGGCTATGGA TGGTGGCCAT TACACCAGGA
  AAGCCTTGGG CTAGAGGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss135873131	ENSMUSSNP1494369	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss320957510	CHEV_3_127556415	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs108760328					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127647146 () rs orientation: forward

Symbol	Name	Function Class
Rr584883	regulatory region 584883	1487 bp distal
Rr584884	regulatory region 584884	198 bp distal
Rr584885	regulatory region 584885	within coordinates
Rr584886	regulatory region 584886	15 bp proximal