rs108754401 SNP Detail

Summary

• ID
  rs108754401
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55682816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCCAGGA ACAATGAGTA
  TGCTGAGAGA GGGTGATCCT AGGACAGGAT GCTGATGGTC TTTGCTTTTG TTTTTGTCTC
  ATCTCCCTTG TCAATCAACT AGAAAAAGGT AACACTAACA AGGGAGATTA TTCCTCTGAA
  AATGGCCAAA TGATTAATCC TATGAAATAT CCTAGACATA AGAAGAAAGG TATTTTGGTC
  R
  TGAGCCTAGC CTTTAATGGC TGAGCCATCT CTCCAGCCCA AAATACCCAT GGAAGGAGTT
  ACAGAGACAA AGTTTGGAGC AGAGACTGAA GGAATGACCA TCCAAAGACT ACCCCACCTG
  GGGATCCATC CTATATACAA CCACCAAACC CAGACACTGT TGTGGATGCC AACAAGAGCT
  TGCTGAAAGG AGACTGAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133214648	ENSMUSSNP4010726	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108754401					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55682816 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	1034 bp distal
Rr631016	regulatory region 631016	1437 bp distal