rs108732211 SNP Detail

Summary

• ID
  rs108732211
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:136469275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CACAGAGACA CACACACTCA CACACACACA TGCACACACA
  GACACACACA TACACACACA CTCACACACA TACACACACT CACACACATA CACACACACT
  C
  ACACACACAC ATACACACAC ACTCACACAA CATACACACA CTCACACACG AGTCAGAGAG
  TGTATTTTAT TTACGATTAA ATATTTCTAA AGTTTTATTT T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135937352	ENSMUSSNP679374	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs108732211					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:136469275 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ppp3ca	protein phosphatase 3, catalytic subunit, alpha isoform			Intron
				Noncoding-Transcript-Variant
Rr585866	regulatory region 585866			1564 bp distal
Rr585867	regulatory region 585867			190 bp proximal