rs108723901 SNP Detail

Summary

• ID
  rs108723901
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135750988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GGCAGGCAGA TTTCTGAGTT CGAGGCCAGC CTGGTCTACA
  GAGTGAATTC CAGGACAGCC AGGGCTATAC AGAGAAACCC TGTGTCGGAA AGAAAGAAAG
  R
  AAGAAAGAAA GAAAGGAAGG AAGGAAGGAA GAAAGAAAGA AAGAAAGAAA GAAAGAAAGA
  AAGAAAGAAA GAAAGAGAGA GAGGAAGGAA GAAGACAAAC T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147556028	ENSMUSSNP6458655	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108723901					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135750988 () rs orientation: forward

Symbol	Name	Function Class
Gm68304	predicted gene, 68304	within coordinates
Rr398604	regulatory region 398604	1705 bp downstream
Rr602239	regulatory region 602239	1925 bp distal
Rr602240	regulatory region 602240	1666 bp distal
Rr602241	regulatory region 602241	1476 bp distal
Rr602242	regulatory region 602242	1825 bp proximal
Tssr44024	transcription start site region 44024	1983 bp upstream
Tssr44025	transcription start site region 44025	1941 bp upstream