rs108704800 SNP Detail

Summary

• ID
  rs108704800
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148546198 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGT AATCCGCCTG CCTCTGCTTC
  T
  CGAATGCTGG GATTAAAGGT GTGCG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss148008290	ENSMUSSNP4998073	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321420587	CHEV_4_147835850	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs108704800					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148546198 () rs orientation: forward

Symbol	Name	Function Class
Mtor	mechanistic target of rapamycin kinase	Intron
Rr604688	regulatory region 604688	317 bp distal
Rr604689	regulatory region 604689	221 bp proximal
Rr604690	regulatory region 604690	1213 bp proximal
Rr604691	regulatory region 604691	1323 bp proximal
Rr604692	regulatory region 604692	1745 bp proximal