rs108688352 SNP Detail

Summary

• ID
  rs108688352
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17255016 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      G TGCTCTGACT ACTGAAACTC AGGAGAGGGC TAGTCTCTCA
  GGTCTGCTGA TAGACACTAA CAGAATCACA AGAGGAACAA GCTCTAACCA GAGACAACTA
  Y
  AACAACTGAC TCCAGAGATT ACCGGATGGT GAGAGGCAAA CGTAAGAATC TTAGTAACAG
  AAGCCAAGAC CACTCACCAT CATCAGAATG CAGCATTCCC A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss149066717	ENSMUSSNP1118143	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108688352					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17255016 () rs orientation: reverse

Symbol	Name	Function Class
Rr573816	regulatory region 573816	995 bp proximal