rs108682989 SNP Detail

Summary

• ID
  rs108682989
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGTTTTCTTG TGGTATCTTT GACTCCTGAC TTCAGCAATG
  TTTCCTCACA GTCTGTTTCA CTCATTGTCC AAGTTCCACC TAAAGTTTTT TTCCCAGTCT
  G
  ACACTTGTAG TGACTCCTTC TCAAGAAAGA AAAGCTTTTC TATTAGTAAT TAATCTATGT
  GCATAGAAAT TAATAAAAAG TATCATTACT AAATATATAA A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138784499	ENSMUSSNP3035837	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108682989					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441961 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	666 bp downstream
Tssr3975	transcription start site region 3975	1150 bp downstream
Tssr118082	transcription start site region 118082	1165 bp downstream