rs108676073 SNP Detail

Summary

• ID
  rs108676073
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:60477549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G ATCATCAGTC AGACCAGAAG AGCACCGCTG ATTACCCACT
  GAATTATGCA TACAAATATT TGCAACATCC TGAGTAATTA ACTCATAAAA ATAAACAATT
  A
  CCATAATGGA GATTGAGTGA ATTTCCATAT ATTTTCCACT CCTAAAAATA CTATCCAGCT
  GGTTAATACT ATTATATTTC TTAAAGAGAA ATATTTAGAT A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135219659	ENSMUSSNP3706086	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs108676073					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60477549 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mbnl1	muscleblind like splicing regulator 1			Intron
				Noncoding-Transcript-Variant
Rr375057	regulatory region 375057			within coordinates
Rr577425	regulatory region 577425			1392 bp distal
Rr577426	regulatory region 577426			957 bp distal
Rr577427	regulatory region 577427			509 bp distal
Rr577428	regulatory region 577428			306 bp proximal